Statistical and Computational Challenges in Large Scale Molecular Biology

Videos from BIRS Workshop 17w5131

, Carnegie Mellon University
- 10:20
Large scale machine learning tutorial
Watch video | Download video: 201703270918-Xing.mp4 (201M)
, Columbia University
- 11:02
QRank: A novel quantile regression tool for eQTL discovery
Watch video | Download video: 201703271036-Li.mp4 (88M)
, Centre national de la recherche scientifique
- 11:28
Representing Genetic Determinants in Bacterial GWAS with Compacted De Bruijn Graphs
Watch video | Download video: 201703271103-Jacob.mp4 (77M)
, CNRS
- 11:55
Post hoc inference for multiple testing
Watch video | Download video: 201703271130-Neuvial.mp4 (70M)
, University of Utah
- 14:45
Inferring function from constrained coding regions in the human genome
Watch video | Download video: 201703271420-Quinlan.mp4 (77M)
, UCLA
- 15:55
Systematic Discovery of Conservation States for Single-Nucleotide Annotation of the Human Genome
Watch video | Download video: 201703271531-Ernst.mp4 (65M)
, John Hopkins University
- 16:20
Brain region-specific DNA methylation and chromatin accessibility
Watch video | Download video: 201703271556-Hansen.mp4 (81M)
, Stanford University
- 16:52
Longitudinal study of gene expression in a Swedish population sample
Watch video | Download video: 201703271622-Balliu.mp4 (109M)
, University of Chicago
- 17:21
Impact of regulatory variation across human iPSCs and differentiated cells
Watch video | Download video: 201703271654-Gilad.mp4 (99M)
, University of Toronto
- 17:46
Investigating the source and function of most of the genome: endogenous retroelements and the proteins that bind them
Watch video | Download video: 201703271721-Hughes.mp4 (82M)
, UC Berkeley
- 11:17
Studying the 3D structure of the P falciparum's genome by modeling contact counts as random Negative Binomial variables
Watch video | Download video: 201703281050-Varoquaux.mp4 (91M)
, Princeton University
- 11:45
Algorithms for Inferring Evolution and Migration of Tumors
Watch video | Download video: 201703281118-Raphael.mp4 (79M)
, MINES ParisTech
- 13:56
Cancer stratification from mutation profiles
Watch video | Download video: 201703281330-Vert.mp4 (79M)
, Stanford
- 14:23
The links between DNA variation and complex traits
Watch video | Download video: 201703281357-Li.mp4 (83M)
, KU Leuven
- 14:52
Bayesian matrix factorization with side information and application to drug-target activity prediction and gene prioritization
Watch video | Download video: 201703281425-Moreau.mp4 (85M)
, Université Lyon 1
- 16:00
Heritability estimation in high-dimensional sparse linear mixed models
Watch video | Download video: 201703281538-Bonnet.mp4 (83M)
, Massachusetts Institute of Technology and Broad Institute
- 16:55
Mediation analysis, multi-tissue factor QTLs, EHRs, transfer learning in deep CNNs for genetics
Watch video | Download video: 201703281628-Kellis.mp4 (89M)
, Massachusetts Institute of Technology
- 18:05
The major determinants of genome-wide splicing efficiency in flies
Watch video | Download video: 201703281656-Pai.mp4 (218M)
, Smith College
- 09:30
Towards automated population genetic inference using deep neural networks
Watch video | Download video: 201703290902-Sheehan.mp4 (84M)
, Stanford University
- 09:58
Deep learning approaches to denoise, impute, integrate and decode functional genomic data
Watch video | Download video: 201703290930-Kundaje.mp4 (86M)
, Stanford University
- 10:33
Learning a mapping from pre-mRNA sequence to splice site usage to understand RNA splicing variation
Watch video | Download video: 201703291000-Knowles.mp4 (103M)
, Calico Labs
- 11:08
Sequential regulatory activity prediction with long-range convolutional neural networks
Watch video | Download video: 201703291034-Kelley.mp4 (143M)
, Johns Hopkins Bloomberg School of Public Health
- 09:47
Data science as a science
Watch video | Download video: 201703300926-Leek.mp4 (93M)
, University of Pennsylvania
- 10:07
Statistical and experimental methods for causal inference at complex trait associated loci
Watch video | Download video: 201703300948-Brown.mp4 (59M)
, John Hopkins University
- 11:03
Summarizing tens of thousands of RNA-seq samples: themes and lessons
Watch video | Download video: 201703301037-Langmead.mp4 (76M)
, Johns Hopkins
- 11:34
In silico phenotyping to improve the usefulness of public data
Watch video | Download video: 201703301105-Ellis.mp4 (118M)
, Memorial Sloan-Kettering Cancer Center
- 14:02
Integrating omics data for cancer classification and prognosis
Watch video | Download video: 201703301336-Shen.mp4 (70M)
, UCSC
- 14:24
Unmasking all forms of cancer: toward integrated maps of all tumor subtypes
Watch video | Download video: 201703301402-Stuart.mp4 (80M)
, University College London
- 14:46
Predictive Integration of Networked Big Data
Watch video | Download video: 201703301425-Przulj.mp4 (64M)
, University Health Network
- 15:12
Integrative cancer pharmacogenomics to infer large-scale drug taxonomy
Watch video | Download video: 201703301447-HaibeKains.mp4 (77M)
, Princeton University
- 15:59
Intersecting pathology images and gene expression data to understand drivers of complex phenotypes
Watch video | Download video: 201703301533-Engelhardt.mp4 (80M)
, Johns Hopkins University
- 16:24
Chromosome Conformation in Context
Watch video | Download video: 201703301600-Taylor.mp4 (80M)
, University of Chicago
- 16:55
Propagating consequences of molecular mechanisms into complex phenotypes
Watch video | Download video: 201703301625-Im.mp4 (105M)