Mathematical Frameworks for Integrative Analysis of Emerging Biological Data Types (Online)

Videos from BIRS Workshop 20w5197

, Dana-Farber Cancer Institute
- 06:24
Keynote Talk (Cortex seq-FISH study)
Watch video | Download video: 202006150530-Yuan.mp4 (136M)
, INSERM
- 07:21
CORTEX seq-FISH: clustering
Watch video | Download video: 202006150700-Coullomb.mp4 (31M)
, Stanford Cancer Institute
- 07:38
CORTEX seq-FISH: selection of spatial coherent genes
Watch video | Download video: 202006150721-Xu.mp4 (25M)
, Department of Statistics, University of Padua
- 07:55
CORTEX seq-FISH: software structure and data integration
Watch video | Download video: 202006150739-Righelli.mp4 (39M)
, University of British Columbia
- 08:40
CORTEX seq-FISH: integration with scRNA-seq data
Watch video | Download video: 202006150821-Singh.mp4 (28M)
, University of Michigan Medical School
- 09:00
CORTEX seq-FISH: integration with scRNA-seq data
Watch video | Download video: 202006150841-Sodicoff.mp4 (40M)
, The University of Sydney
- 07:20
sc targeted proteomics: Predicting outcome, survival from 3 proteomics datasets (Keren, Jackson, Wagner)
Watch video | Download video: 202006160700-Lin.mp4 (30M)
, BayBioMS TU Munich
- 07:36
sc targeted proteomics: comparing multi-block PCA, linear regression
Watch video | Download video: 202006160720-Meng.mp4 (36M)
, Standford University
- 07:51
sc targeted proteomics:Stan model for latent Dirichlet allocation
Watch video | Download video: 202006160736-Jeganathan.mp4 (22M)
, Quebec AI Institute
- 08:05
sc targeted proteomics: spatial analysis
Watch video | Download video: 202006160751-Sankaran.mp4 (24M)
, University of Toronto
- 09:00
Networks - learning salient gene and protein features from network topologies.
Watch video | Download video: 202006160840-Forster.mp4 (42M)
, German Cancer Research Centre & EMBL
- 06:32
Keynote Talk (scNMT-seq study)
Watch video | Download video: 202006170532-Stegle.mp4 (104M)
, The University of Melbourne
- 07:21
scNMT-seq: multivariate integrative analyses
Watch video | Download video: 202006170700-Abadi.mp4 (37M)
, University of Michigan
- 07:40
scNMT-seq: LIGER
Watch video | Download video: 202006170721-Welch.mp4 (29M)
, Memorial Sloan Kettering Cancer Center
- 07:59
scNMT-seq:MOSAIC, or Multi-Omic Supervised Integrative Clustering
Watch video | Download video: 202006170741-Arora.mp4 (30M)
, Altius Institute for Biomedical Sciences
- 08:31
DNase-seq data as a scaffold for complementary (single cell) datasets
Watch video | Download video: 202006170810-Meuleman.mp4 (31M)
, Stanford University
- 07:02
Keynote Talk: Computational Challenges
Watch video | Download video: 202006180601-Holmes.mp4 (83M)
, UNC-Chapel Hill
- 08:02
Benchmarking
Watch video | Download video: 202006180730-Love.mp4 (46M)
, University of Pennsylvania
- 08:13
Writing with Manubot
Watch video | Download video: 202006180803-Greene.mp4 (32M)
, Channing Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School
- 07:00
Software Infastructure
Watch video | Download video: 202006190602-Carey.mp4 (108M)